Medical Imaging Course -- BME 595
to be held Spring 2002

Class Location Clinical Building room CL 126
Class Time: Tues, Thurs  3:45pm-5:00pm.
Course reading material for sale in Cavanaugh Hall bookstore
 
 

For Results from Logan plots on all real CFT PET data, click Here





Syllabus Spring 2002

Flashy Course Announcement!

Required and Supplementary Reading

More Supplementary Reading - On reserve in CL 157.

Contact list

Useful links  (thanks to Mike Miller for the first one!)

Lectures

Instructor Title Homework Date
All   handout-1, handout-2 Jan   8
Dzemidzic
Introduction
 handout-3 Jan 10
Dzemidzic
Atomic Structure
 Jan 15
Dzemidzic
Interactions of Radiation and Matter / X-ray Physics
 Jan 17
Dzemidzic/Liang
X-ray Physics Summary / Radiography
 homework-1 Jan 22
Liang
CT Instrumentation
 Jan 24
Rouze Radon Transformation Jan 29
Rouze Inverse Radon Transformation Jan 31
Rouze Discrete Methods Feb  5
Dzemidzic
Nuclear (noo'  -klee -er) Physics
 homework-6 Feb  7
Rouze Nuclear Medicine Instumentation -1 Feb 12 
Rouze Nuclear Medicine Instrumentation - 2 (PET) Feb 14
Rouze Bayesian Methods Feb 19
Rouze/Liang Tour of PET/CT facillities Feb 21
Morris
Compartmental Modeling Basics
 handout/homework-M1 Feb 26
Midterm
 reading for 3/5 Feb 28
Morris
Finish Blood Flow, Examine PET data flow
 Matlab code fragment Mar  5
Morris
Lookup Tables in BF, Plots with Correlated Data
 Mar  7
Spring Break
don't forget the homeowrk - see below
 homework solutions (BF simulations) Mar 12 
Spring Break
 Mar 14
Morris
Receptor Imaging and Logan Plot
 summary of receptor study simulations Mar 19
Morris
Receptor Models and Blood Flow Model
 Evan's and Class Logan plot results Mar 21
Morris
Logan Plot Homework, Resolution Effects, Reference Region Model
 Watch this spot for PSP data! Mar 26
Liang Ultrasound Mar 28
Li
MR Physics
 April  2
Li
MRI Data Acquisition
 MRI Homework 2 (due April 9) April 4
Morris
Analysis of PET data for Class Project - Instructions
 Background Reading: Brashear et al April 9
Li
MR Contrast and Enhancement
 April 11
Li
Reconstruction/Fast MR
 April 16
Li
BOLD/functional MRI
 April 18
Li
Diffusion Tensor Imaging
 April 23
Morris/Li Special Topics - Perfusion w/ MR,PET,CT April 25
 
Final Exam April 30

Contact Evan Morris, PhD for further information: 274-1802

Back to Evan's home page.

IUPUI PET Journal Club Page


Blood Flow Linearization Homework files -----   DON'T TAKE THESE -- THEY ARE FROM LAST WEEK
 
Alex1 Carolina1 Chris1 Eric1 Judy1
Alex2 Carolina2 Chris2 Eric2 Judy2
Alex3 Carolina3 Chris3 Eric3 Judy3

Logan Plot Linearization of Receptor Binding Model Homework Files
 
Alex1 striatum Carolina1 striat Chris1 striat Eric1 striat Judy1 striat Karmen1 striat Mike1 striatMike1str-redo
Alex1 cerebellum Carolina1 cerebel Chris1 cereb Eric1 cereb Judy1 cereb Karmen1 cereb Mike1 cerebMike1 cb-redo
Alex2 striatum Carolina2 striat Chris2 striat Eric2 striat Judy2 striat Karmen2 striat Mike2 striat
Alex2 cerebellum Carolina2 cerebel Chris2 cereb Eric2 cereb Judy2 cereb Karmen2 cereb Mike2 cereb
Alex3 str Carolina3 str Chris3 str Eric3 str Judy3 str Karmen3 str Mike3 str

Logan Plot results from CFT studies of Parkinsons and other patient groups

Spreadsheet of results

Spreadsheet results with variances, p-values

Guidelines for write-up of Logan plot results from CFT data.
 
 
 

Table of useful/interseting links
 
Principles of Computerized Tomographic Imaging, by Kak and Slaney
                                                                                                                                                                Created October 15, 2001 by EDM